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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T HSCB chr22:29138019-29153503:+ 0.62 8.29 1.16E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T KLHL22 chr22:20795806-20850170:- 0.71 8.63 8.91E-17 Box Plot
THCA rs6010472 chr22:49157038 A/T L3MBTL2 chr22:41601209-41627275:+ 0.79 8.23 1.85E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T LDOC1L chr22:44888452-44894178:- 0.43 6.77 3.71E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T LMF2 chr22:50941378-50946120:- 0.59 7.7 7.91E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T LOC150381 chr22:46449726-46454400:+ 0.48 6.18 1.35E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T LOC284900 chr22:28315364-28404267:+ 0.57 8.57 1.49E-16 Box Plot
THCA rs6010472 chr22:49157038 A/T LZTR1 chr22:21333751-21353327:+ 0.63 7.6 1.6E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T MAPK1 chr22:22108789-22221970:- 0.48 7.36 8.13E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T MCAT chr22:43528212-43539400:- 0.46 6.64 8.49E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T MED15 chr22:20850200-20941919:+ 0.44 7.13 3.65E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T MKL1 chr22:40806285-41032706:- 0.6 7.53 2.5E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T MPST chr22:37415676-37425863:+ 0.54 7.44 4.57E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T MTMR3 chr22:30279144-30426855:+ 0.54 6.79 3.31E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T MTP18 chr22:30805176-30825041:+ 0.55 6.71 5.61E-11 Box Plot